Software and Data Sets

The SPL and its affiliated labs make different software packages and data sets available. Many of these packages are developed in the context of collaborative activities.

Data Sets

Multi-modality MRI-based Atlas of the Brain 
The brain atlas is based on a MRI scan of a single individual.

Slicer4.5 08/2015 version
Slicer4.4 11/2015 version
2011 release
2008 release
New Atlas Viewer

SPL Knee Atlas 
The knee atlas was derived from a MRI scan. 
Slicer4 version
2011 release

New Atlas Viewer

CT Atlas of the Abdomen 
The abdomen atlas was derived from a computed tomography (CT) scan.

Slicer4.4 09/2015 version
Slicer4 version
2011 release
2008 release
New Atlas Viewer

CT-based Atlas of the Head and Neck 
The head and neck atlas was derived from a reduced resolution (256x256) CT MANIXdata set from the OSIRIX data sets.

New Atlas Viewer

CT-based Atlas of the Ear 
The ear atlas was derived from a high-resolution flat-panel computed tomography (CT) scan (approx. 140 µm high contrast resolution).

Download

SPL Automated Segmentation of Brain Tumors Image Datasets
A repository of 10 automated and manual segmentations of meningiomas and low-grade gliomas.

Download

SPL Brain Tumor Resection Image Datasets 
A repository of 10 non-rigidly registered MRT brain tumor resections datasets.

Download

Software

Version 4 Version 3 Version 2.6